CDS

Accession Number TCMCG002C27555
gbkey CDS
Protein Id XP_020109389.1
Location complement(join(7434331..7434462,7434535..7434678,7435170..7435268,7436306..7436356,7438236..7439440,7439519..7439654))
Gene LOC109724859
GeneID 109724859
Organism Ananas comosus

Protein

Length 588aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020253800.1
Definition probable E3 ubiquitin-protein ligase HIP1 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category O
Description Ring finger domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10635        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031624        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044390        [VIEW IN EMBL-EBI]
GO:0045926        [VIEW IN EMBL-EBI]
GO:0046620        [VIEW IN EMBL-EBI]
GO:0046621        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048640        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051865        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1900055        [VIEW IN EMBL-EBI]
GO:1900057        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1905623        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGGGGCAAAAGAATAACTTGCATTCATGTTCTGAAACATATCAATTTGACCTTGGTTCTAATTCGAACGCCTCCGGCATGGATCACCGTAATTTGCCTCCTCTCAGTGCCATGGATGCCCAGAATTTGCCAGGTGAACAAAGGTCAGCTAGCAGGCAATCTGAAGCGAACAATGGGCCATCTTTGGAAAGTGTGAATTTAAATCTTAATATTAATCAGATTGATCATGGTCAATCAGTGCACAACACAGGGAATGTTGGTGGGAGCGTTCAGGAGCTAGAATCGGGACCAAGTCCACTGCCTTATAATACAGGCCTATTACCACCTGAGCATTTATACTTAGCTGGTGCTTCATCAGATAACTTTGGAAGCTCATCGAGGGGCCATCGTTCGTCTAACAAGAGAAAGAATATTGGCGGAGTTCCTGGGCAGCCTTCACTCTGCCAAAGCTCAAGTTATCATCACCCAAATGAGGATAGATTGTTGTCTCCTGCTTCATTTTGTAATAGTGCAAATACTACTAACACATCTGGCTCATCTAATAATAATACTACTAGTCCGCATCCTCGAGTGGTACAGACAACACCAGTGGCTTCTAATTACCATTCAGGTAGCGCGGAAAGCTTTGTAAGGAGTATGAGGATGAGAATCGACCCCCATCAGTATGACATACCCTTGCCCGATCTATATCCGCCAAGGAGTAGCAGCAGCCATTCTAATCAATGGTCTCTGCATCAGCCATCGTATACTACTATACATCAGTCAGAGGAATCTAGGCTTTCAGTTAACAATGTGAGTTCACATGGTCACCCTTTGATTATTCCTGAAGCATCTCGAGACATGCACCCTTGTCCACCGAATGGGACTTCTGATTCAAGAATAGGAAGTTCTTCAAGTTCCATGAGAAATATTTCTGAGCACTTGATGTTTGTTCCTCCAACTAATAACAATCATTTAGCACAAGGCTCTACAAACTGGCATTCGACTAGTGAAAACAGAGTCATGCATGGGAGCGCAAGTTCCAGTGCAGCCATTCAACCTGCAGAACCACAAGTAATAACTCGTAGAAGTCCGTCAACCTATAATCACCGGAGTGCTTCAGAGACTGCCCATGCTCCGCCCAGAAGTTGGAGTGCACCTCCCCAGCGTGATGTCCATTTTGTTACTTCACGTGAGTTTGGAAGCCGACTTTCAGGAACTGGTTTACGTGCCCATCAGCAACCATACTTGAGATCGGCTGCTTCGACTGACAGGCAAAATGATGGTCTTTTGGGTGTTCCCTTATTCATGCGAACTCTGGCGGTTGCAAGAGAAGGACGAAGTAGGATGCTATCAGAGATCCGTAATATGTTAGATCTTCTACGACGAGGCGAAAACATGCGACTTGAGGACGTTCTTATCTTCGACCAGTCAATGTTTTTTGGTGGCCCCGATATGCACGATAGGCACCGCGACATGCGGCTTGATGTGGATAATATGTCTTATGAGGAGCTGCTGGCGTTGGAAGAACGGATAGGAAATGTAAACACCGGATTGAGCGAAGAAAAAATCATAAAGTGTTTGAAGCGAAGGAAATATTTCTCTATTTCATCTGAGACATTAGAGGAAATTGAACCATGTTGTGTTTGCCAGGAAGAATATGTTGAAGGCGAGGATCTTGGGAGACTGGATTGCGGGCATGACTTCCATACCGCCTGCATCAAACAGTGGCTAATGCTCAAGAATTTGTGTCCCGTCTGTAAAGCAACGGGTCTCGCTACCTGA
Protein:  
MQGQKNNLHSCSETYQFDLGSNSNASGMDHRNLPPLSAMDAQNLPGEQRSASRQSEANNGPSLESVNLNLNINQIDHGQSVHNTGNVGGSVQELESGPSPLPYNTGLLPPEHLYLAGASSDNFGSSSRGHRSSNKRKNIGGVPGQPSLCQSSSYHHPNEDRLLSPASFCNSANTTNTSGSSNNNTTSPHPRVVQTTPVASNYHSGSAESFVRSMRMRIDPHQYDIPLPDLYPPRSSSSHSNQWSLHQPSYTTIHQSEESRLSVNNVSSHGHPLIIPEASRDMHPCPPNGTSDSRIGSSSSSMRNISEHLMFVPPTNNNHLAQGSTNWHSTSENRVMHGSASSSAAIQPAEPQVITRRSPSTYNHRSASETAHAPPRSWSAPPQRDVHFVTSREFGSRLSGTGLRAHQQPYLRSAASTDRQNDGLLGVPLFMRTLAVAREGRSRMLSEIRNMLDLLRRGENMRLEDVLIFDQSMFFGGPDMHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLSEEKIIKCLKRRKYFSISSETLEEIEPCCVCQEEYVEGEDLGRLDCGHDFHTACIKQWLMLKNLCPVCKATGLAT